Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox5P35710 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.2■□□□□ 0.18
Sox5P35710 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox5P35710 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox5P35710 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Sox5P35710 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox5P35710 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sox5P35710 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Sox5P35710 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.19■□□□□ 0.18
Sox5P35710 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.19■□□□□ 0.18
Sox5P35710 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sox5P35710 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.19■□□□□ 0.18
Sox5P35710 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Sox5P35710 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox5P35710 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox5P35710 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.18■□□□□ 0.18
Sox5P35710 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Gm25990-201ENSMUST00000102440 86 ntBASIC16.18■□□□□ 0.18
Sox5P35710 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Sox5P35710 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.18■□□□□ 0.18
Sox5P35710 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Sox5P35710 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Sox5P35710 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.18■□□□□ 0.18
Sox5P35710 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Sox5P35710 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox5P35710 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox5P35710 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.17■□□□□ 0.18
Sox5P35710 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox5P35710 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox5P35710 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms