Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.73□□□□□ -0.53
Rom1P32958 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.73□□□□□ -0.53
Rom1P32958 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.73□□□□□ -0.53
Rom1P32958 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.73□□□□□ -0.53
Rom1P32958 Gm45328-201ENSMUST00000210942 917 ntBASIC11.73□□□□□ -0.53
Rom1P32958 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Gm18622-201ENSMUST00000219361 595 ntBASIC11.73□□□□□ -0.53
Rom1P32958 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rom1P32958 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.73□□□□□ -0.53
Rom1P32958 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rom1P32958 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.73□□□□□ -0.53
Rom1P32958 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rom1P32958 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rom1P32958 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.72□□□□□ -0.53
Rom1P32958 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.72□□□□□ -0.53
Rom1P32958 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Rom1P32958 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rom1P32958 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rom1P32958 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.72□□□□□ -0.53
Rom1P32958 Gm44454-201ENSMUST00000198541 138 ntBASIC11.72□□□□□ -0.53
Rom1P32958 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Rom1P32958 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Rom1P32958 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rom1P32958 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rom1P32958 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rom1P32958 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Rom1P32958 Gm15358-201ENSMUST00000119249 520 ntBASIC11.71□□□□□ -0.53
Rom1P32958 Gm12497-201ENSMUST00000138778 237 ntBASIC11.71□□□□□ -0.53
Rom1P32958 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.71□□□□□ -0.53
Rom1P32958 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.71□□□□□ -0.53
Rom1P32958 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Rom1P32958 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.71□□□□□ -0.53
Rom1P32958 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.71□□□□□ -0.53
Rom1P32958 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rom1P32958 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.71□□□□□ -0.54
Rom1P32958 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rom1P32958 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rom1P32958 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rom1P32958 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms