Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Gm13616-201ENSMUST00000120600 222 ntBASIC14.37□□□□□ -0.11
Hoxc11P31313 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxc11P31313 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxc11P31313 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxc11P31313 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Mir6956-201ENSMUST00000183598 62 ntBASIC14.36□□□□□ -0.11
Hoxc11P31313 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Gm43474-201ENSMUST00000196415 774 ntBASIC14.36□□□□□ -0.11
Hoxc11P31313 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.36□□□□□ -0.11
Hoxc11P31313 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.36□□□□□ -0.11
Hoxc11P31313 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxc11P31313 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxc11P31313 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxc11P31313 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc11P31313 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.35□□□□□ -0.11
Hoxc11P31313 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Gm43125-201ENSMUST00000201724 730 ntBASIC14.35□□□□□ -0.11
Hoxc11P31313 Gm18057-201ENSMUST00000208220 503 ntBASIC14.35□□□□□ -0.11
Hoxc11P31313 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.35□□□□□ -0.11
Hoxc11P31313 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hoxc11P31313 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxc11P31313 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxc11P31313 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hoxc11P31313 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms