Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PdgfbP31240 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PdgfbP31240 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PdgfbP31240 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PdgfbP31240 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PdgfbP31240 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.74□□□□□ -0.05
PdgfbP31240 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Gm12390-201ENSMUST00000117897 397 ntBASIC14.74□□□□□ -0.05
PdgfbP31240 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PdgfbP31240 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PdgfbP31240 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.74□□□□□ -0.05
PdgfbP31240 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PdgfbP31240 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PdgfbP31240 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PdgfbP31240 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.73□□□□□ -0.05
PdgfbP31240 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.73□□□□□ -0.05
PdgfbP31240 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.73□□□□□ -0.05
PdgfbP31240 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.73□□□□□ -0.05
PdgfbP31240 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PdgfbP31240 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PdgfbP31240 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.72□□□□□ -0.05
PdgfbP31240 Gm5354-201ENSMUST00000182417 973 ntBASIC14.72□□□□□ -0.05
PdgfbP31240 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PdgfbP31240 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.72□□□□□ -0.05
PdgfbP31240 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PdgfbP31240 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PdgfbP31240 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PdgfbP31240 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PdgfbP31240 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PdgfbP31240 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms