Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.97■□□□□ 0.31
Vcam1P29533 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.97■□□□□ 0.31
Vcam1P29533 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vcam1P29533 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.97■□□□□ 0.31
Vcam1P29533 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.97■□□□□ 0.31
Vcam1P29533 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcam1P29533 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vcam1P29533 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.96■□□□□ 0.31
Vcam1P29533 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.96■□□□□ 0.31
Vcam1P29533 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Vcam1P29533 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Vcam1P29533 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Vcam1P29533 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vcam1P29533 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcam1P29533 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcam1P29533 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcam1P29533 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcam1P29533 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcam1P29533 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcam1P29533 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcam1P29533 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vcam1P29533 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Vcam1P29533 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Vcam1P29533 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.95■□□□□ 0.3
Vcam1P29533 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.95■□□□□ 0.3
Vcam1P29533 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Vcam1P29533 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vcam1P29533 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcam1P29533 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Gm5745-201ENSMUST00000183748 313 ntBASIC16.94■□□□□ 0.3
Vcam1P29533 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.94■□□□□ 0.3
Vcam1P29533 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vcam1P29533 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcam1P29533 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.94■□□□□ 0.3
Vcam1P29533 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vcam1P29533 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Vcam1P29533 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcam1P29533 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms