Protein–RNA interactions for Protein: P28311

Defa4, Alpha-defensin 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa4P28311 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Defa4P28311 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Defa4P28311 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.16□□□□□ -0.78
Defa4P28311 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Defa4P28311 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Defa4P28311 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Defa4P28311 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Defa4P28311 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Defa4P28311 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Defa4P28311 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Defa4P28311 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.15□□□□□ -0.78
Defa4P28311 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Defa4P28311 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Defa4P28311 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Defa4P28311 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC10.15□□□□□ -0.78
Defa4P28311 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.15□□□□□ -0.78
Defa4P28311 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC10.15□□□□□ -0.78
Defa4P28311 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.15□□□□□ -0.78
Defa4P28311 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.15□□□□□ -0.78
Defa4P28311 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.15□□□□□ -0.78
Defa4P28311 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Defa4P28311 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.15□□□□□ -0.78
Defa4P28311 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Defa4P28311 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Defa4P28311 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.15□□□□□ -0.79
Defa4P28311 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Defa4P28311 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.15□□□□□ -0.79
Defa4P28311 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Defa4P28311 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Defa4P28311 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Defa4P28311 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Defa4P28311 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Defa4P28311 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Defa4P28311 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Defa4P28311 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.14□□□□□ -0.79
Defa4P28311 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Defa4P28311 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Defa4P28311 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC10.14□□□□□ -0.79
Defa4P28311 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.14□□□□□ -0.79
Defa4P28311 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.14□□□□□ -0.79
Defa4P28311 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Defa4P28311 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Defa4P28311 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Defa4P28311 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.14□□□□□ -0.79
Defa4P28311 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.14□□□□□ -0.79
Defa4P28311 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Defa4P28311 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Defa4P28311 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms