Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.19■□□□□ 0.18
Pde6bP23440 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.19■□□□□ 0.18
Pde6bP23440 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.19■□□□□ 0.18
Pde6bP23440 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.19■□□□□ 0.18
Pde6bP23440 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6bP23440 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.19■□□□□ 0.18
Pde6bP23440 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.18■□□□□ 0.18
Pde6bP23440 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Pde6bP23440 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
Pde6bP23440 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.18■□□□□ 0.18
Pde6bP23440 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6bP23440 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pde6bP23440 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Gm2810-201ENSMUST00000118681 990 ntBASIC16.17■□□□□ 0.18
Pde6bP23440 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.17■□□□□ 0.18
Pde6bP23440 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.17■□□□□ 0.18
Pde6bP23440 Gm38225-201ENSMUST00000194001 393 ntBASIC16.17■□□□□ 0.18
Pde6bP23440 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pde6bP23440 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.17■□□□□ 0.18
Pde6bP23440 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pde6bP23440 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.17■□□□□ 0.18
Pde6bP23440 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pde6bP23440 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.17■□□□□ 0.18
Pde6bP23440 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pde6bP23440 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pde6bP23440 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.16■□□□□ 0.18
Pde6bP23440 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pde6bP23440 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pde6bP23440 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms