Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd48P18181 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd48P18181 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd48P18181 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd48P18181 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cd48P18181 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cd48P18181 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Cd48P18181 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cd48P18181 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.31□□□□□ -0.28
Cd48P18181 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cd48P18181 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cd48P18181 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.31□□□□□ -0.28
Cd48P18181 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cd48P18181 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.31□□□□□ -0.28
Cd48P18181 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.31□□□□□ -0.28
Cd48P18181 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.31□□□□□ -0.28
Cd48P18181 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cd48P18181 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cd48P18181 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cd48P18181 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Cd48P18181 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.3□□□□□ -0.28
Cd48P18181 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cd48P18181 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cd48P18181 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cd48P18181 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.3□□□□□ -0.28
Cd48P18181 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.3□□□□□ -0.28
Cd48P18181 Gm43347-201ENSMUST00000200226 580 ntBASIC13.3□□□□□ -0.28
Cd48P18181 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.3□□□□□ -0.28
Cd48P18181 Gm7787-201ENSMUST00000216858 688 ntBASIC13.3□□□□□ -0.28
Cd48P18181 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.3□□□□□ -0.28
Cd48P18181 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cd48P18181 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cd48P18181 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.29□□□□□ -0.28
Cd48P18181 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd48P18181 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cd48P18181 Gm7222-201ENSMUST00000117512 906 ntBASIC13.29□□□□□ -0.28
Cd48P18181 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cd48P18181 Gm10499-201ENSMUST00000174094 934 ntBASIC13.29□□□□□ -0.28
Cd48P18181 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.29□□□□□ -0.28
Cd48P18181 Ank2-226ENSMUST00000189368 339 ntBASIC13.29□□□□□ -0.28
Cd48P18181 Gm37153-201ENSMUST00000193637 231 ntBASIC13.29□□□□□ -0.28
Cd48P18181 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.29□□□□□ -0.28
Cd48P18181 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.29□□□□□ -0.28
Cd48P18181 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cd48P18181 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms