Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.38■□□□□ 0.21
Hoxc6P10629 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hoxc6P10629 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Gm45384-201ENSMUST00000210451 277 ntBASIC16.38■□□□□ 0.21
Hoxc6P10629 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Gm15823-201ENSMUST00000064305 670 ntBASIC16.38■□□□□ 0.21
Hoxc6P10629 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.38■□□□□ 0.21
Hoxc6P10629 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Hoxc6P10629 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hoxc6P10629 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Hoxc6P10629 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Gm2451-201ENSMUST00000199447 999 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Gm10290-201ENSMUST00000200451 999 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Gm25857-201ENSMUST00000082788 129 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.37■□□□□ 0.21
Hoxc6P10629 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hoxc6P10629 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hoxc6P10629 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Gm11478-201ENSMUST00000117851 599 ntBASIC16.36■□□□□ 0.21
Hoxc6P10629 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Gm12138-201ENSMUST00000122180 951 ntBASIC16.36■□□□□ 0.21
Hoxc6P10629 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Gm21854-201ENSMUST00000179901 471 ntBASIC16.36■□□□□ 0.21
Hoxc6P10629 Gm9522-201ENSMUST00000182394 926 ntBASIC16.36■□□□□ 0.21
Hoxc6P10629 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Gm9229-201ENSMUST00000222777 126 ntBASIC16.36■□□□□ 0.21
Hoxc6P10629 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.36■□□□□ 0.21
Hoxc6P10629 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Hoxc6P10629 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc6P10629 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.35■□□□□ 0.21
Hoxc6P10629 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Gm8749-201ENSMUST00000117737 331 ntBASIC16.35■□□□□ 0.21
Hoxc6P10629 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.35■□□□□ 0.21
Hoxc6P10629 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.35■□□□□ 0.21
Hoxc6P10629 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.35■□□□□ 0.21
Hoxc6P10629 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Gm9908-201ENSMUST00000211534 448 ntBASIC16.35■□□□□ 0.21
Hoxc6P10629 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.35■□□□□ 0.21
Hoxc6P10629 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.35■□□□□ 0.21
Hoxc6P10629 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.35■□□□□ 0.21
Hoxc6P10629 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc6P10629 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms