Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm28631-201ENSMUST00000190740 334 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm10766-202ENSMUST00000194123 606 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 AA619741-201ENSMUST00000195095 646 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 AC123645.1-201ENSMUST00000228469 605 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxc9P09633 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc9P09633 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.1■□□□□ 0.65
Hoxc9P09633 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19.09■□□□□ 0.65
Hoxc9P09633 Gm8515-201ENSMUST00000194852 576 ntBASIC19.09■□□□□ 0.65
Hoxc9P09633 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc9P09633 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Hoxc9P09633 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Hoxc9P09633 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc9P09633 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.08■□□□□ 0.64
Hoxc9P09633 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Gm6916-202ENSMUST00000205523 195 ntBASIC19.08■□□□□ 0.64
Hoxc9P09633 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hoxc9P09633 Gm45668-201ENSMUST00000211271 493 ntBASIC19.08■□□□□ 0.64
Hoxc9P09633 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.08■□□□□ 0.64
Hoxc9P09633 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Hoxc9P09633 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC19.08■□□□□ 0.64
Hoxc9P09633 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc9P09633 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hoxc9P09633 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Gm18018-201ENSMUST00000198273 408 ntBASIC19.07■□□□□ 0.64
Hoxc9P09633 Gm9797-201ENSMUST00000052902 613 ntBASIC19.07■□□□□ 0.64
Hoxc9P09633 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.07■□□□□ 0.64
Hoxc9P09633 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc9P09633 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.07■□□□□ 0.64
Hoxc9P09633 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.06■□□□□ 0.64
Hoxc9P09633 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc9P09633 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC19.06■□□□□ 0.64
Hoxc9P09633 Gm10275-202ENSMUST00000168697 495 ntBASIC19.06■□□□□ 0.64
Hoxc9P09633 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.06■□□□□ 0.64
Hoxc9P09633 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.06■□□□□ 0.64
Hoxc9P09633 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms