Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ApoeP08226 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ApoeP08226 Gm7506-201ENSMUST00000207758 815 ntBASIC14.04□□□□□ -0.16
ApoeP08226 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ApoeP08226 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.04□□□□□ -0.16
ApoeP08226 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ApoeP08226 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.04□□□□□ -0.16
ApoeP08226 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.03□□□□□ -0.16
ApoeP08226 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.03□□□□□ -0.16
ApoeP08226 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ApoeP08226 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ApoeP08226 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ApoeP08226 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.02□□□□□ -0.16
ApoeP08226 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ApoeP08226 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ApoeP08226 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
ApoeP08226 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
ApoeP08226 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ApoeP08226 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ApoeP08226 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
ApoeP08226 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.01□□□□□ -0.17
ApoeP08226 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.01□□□□□ -0.17
ApoeP08226 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
ApoeP08226 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ApoeP08226 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ApoeP08226 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.01□□□□□ -0.17
ApoeP08226 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.01□□□□□ -0.17
ApoeP08226 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Gm27867-201ENSMUST00000184778 125 ntBASIC14.01□□□□□ -0.17
ApoeP08226 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ApoeP08226 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms