Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.43□□□□□ -0.42
Hoxa3P02831 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.43□□□□□ -0.42
Hoxa3P02831 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm44335-201ENSMUST00000196879 141 ntBASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm44297-201ENSMUST00000198304 141 ntBASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm44346-201ENSMUST00000198851 141 ntBASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Hoxa3P02831 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hoxa3P02831 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa3P02831 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa3P02831 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa3P02831 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hoxa3P02831 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.42□□□□□ -0.42
Hoxa3P02831 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxa3P02831 Gm2272-201ENSMUST00000194903 582 ntBASIC12.42□□□□□ -0.42
Hoxa3P02831 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.42□□□□□ -0.42
Hoxa3P02831 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.42□□□□□ -0.42
Hoxa3P02831 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Hoxa3P02831 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxa3P02831 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.42□□□□□ -0.42
Hoxa3P02831 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.42□□□□□ -0.42
Hoxa3P02831 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hoxa3P02831 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.42□□□□□ -0.42
Hoxa3P02831 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hoxa3P02831 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hoxa3P02831 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.41□□□□□ -0.42
Hoxa3P02831 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms