Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Col4a1P02463 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.97■□□□□ 0.47
Col4a1P02463 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col4a1P02463 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a1P02463 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Col4a1P02463 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a1P02463 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.96■□□□□ 0.47
Col4a1P02463 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.96■□□□□ 0.47
Col4a1P02463 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.96■□□□□ 0.47
Col4a1P02463 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC17.96■□□□□ 0.47
Col4a1P02463 AC139580.1-202ENSMUST00000223574 928 ntBASIC17.96■□□□□ 0.47
Col4a1P02463 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col4a1P02463 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
Col4a1P02463 Efs-202ENSMUST00000227037 2540 ntBASIC17.95■□□□□ 0.46
Col4a1P02463 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Gm12341-201ENSMUST00000119724 503 ntBASIC17.95■□□□□ 0.46
Col4a1P02463 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.95■□□□□ 0.46
Col4a1P02463 Gm43433-201ENSMUST00000196573 481 ntBASIC17.95■□□□□ 0.46
Col4a1P02463 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Col4a1P02463 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col4a1P02463 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Col4a1P02463 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a1P02463 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a1P02463 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Col4a1P02463 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.94■□□□□ 0.46
Col4a1P02463 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col4a1P02463 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.94■□□□□ 0.46
Col4a1P02463 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.94■□□□□ 0.46
Col4a1P02463 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col4a1P02463 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.93■□□□□ 0.46
Col4a1P02463 Gm44719-201ENSMUST00000206404 149 ntBASIC17.93■□□□□ 0.46
Col4a1P02463 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.93■□□□□ 0.46
Col4a1P02463 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.93■□□□□ 0.46
Col4a1P02463 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.93■□□□□ 0.46
Col4a1P02463 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.93■□□□□ 0.46
Col4a1P02463 Gm5035-201ENSMUST00000215581 927 ntBASIC17.93■□□□□ 0.46
Col4a1P02463 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col4a1P02463 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col4a1P02463 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms