Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.56□□□□□ -0.24
P01852 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.56□□□□□ -0.24
P01852 Gm25911-201ENSMUST00000157621 56 ntBASIC13.56□□□□□ -0.24
P01852 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
P01852 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.56□□□□□ -0.24
P01852 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
P01852 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P01852 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
P01852 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
P01852 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
P01852 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.55□□□□□ -0.24
P01852 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Gm4995-201ENSMUST00000117247 432 ntBASIC13.55□□□□□ -0.24
P01852 Gm15427-201ENSMUST00000117288 531 ntBASIC13.55□□□□□ -0.24
P01852 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.55□□□□□ -0.24
P01852 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.55□□□□□ -0.24
P01852 Gm24513-201ENSMUST00000174964 138 ntBASIC13.55□□□□□ -0.24
P01852 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.55□□□□□ -0.24
P01852 Gm43767-201ENSMUST00000198933 381 ntBASIC13.55□□□□□ -0.24
P01852 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.55□□□□□ -0.24
P01852 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.55□□□□□ -0.24
P01852 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
P01852 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.55□□□□□ -0.24
P01852 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
P01852 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.54□□□□□ -0.24
P01852 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
P01852 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.54□□□□□ -0.24
P01852 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
P01852 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.54□□□□□ -0.24
P01852 Gm16198-201ENSMUST00000118766 670 ntBASIC13.54□□□□□ -0.24
P01852 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.54□□□□□ -0.24
P01852 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.54□□□□□ -0.24
P01852 Gm27397-201ENSMUST00000184997 107 ntBASIC13.54□□□□□ -0.24
P01852 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.54□□□□□ -0.24
P01852 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.54□□□□□ -0.24
P01852 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.54□□□□□ -0.24
P01852 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.54□□□□□ -0.24
P01852 Gm10154-201ENSMUST00000084445 354 ntBASIC13.54□□□□□ -0.24
P01852 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.54□□□□□ -0.24
P01852 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P01852 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms