Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Gm17968-201ENSMUST00000194902 784 ntBASIC12.81□□□□□ -0.36
Igh-VJ558P01758 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igh-VJ558P01758 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Gm1401-201ENSMUST00000122048 772 ntBASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Gm2451-201ENSMUST00000199447 999 ntBASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Gm10290-201ENSMUST00000200451 999 ntBASIC12.8□□□□□ -0.36
Igh-VJ558P01758 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igh-VJ558P01758 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm27301-201ENSMUST00000184012 127 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Olfr286-202ENSMUST00000205305 969 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm45747-201ENSMUST00000212203 999 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igh-VJ558P01758 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms