Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.31■□□□□ 0.04
CopeO89079 Gm7284-201ENSMUST00000131667 944 ntBASIC15.31■□□□□ 0.04
CopeO89079 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.31■□□□□ 0.04
CopeO89079 Gm27357-201ENSMUST00000183754 135 ntBASIC15.31■□□□□ 0.04
CopeO89079 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.31■□□□□ 0.04
CopeO89079 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.31■□□□□ 0.04
CopeO89079 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CopeO89079 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CopeO89079 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.31■□□□□ 0.04
CopeO89079 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CopeO89079 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.3■□□□□ 0.04
CopeO89079 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CopeO89079 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CopeO89079 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.3■□□□□ 0.04
CopeO89079 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.3■□□□□ 0.04
CopeO89079 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.3■□□□□ 0.04
CopeO89079 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.3■□□□□ 0.04
CopeO89079 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.3■□□□□ 0.04
CopeO89079 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CopeO89079 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.3■□□□□ 0.04
CopeO89079 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CopeO89079 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.3■□□□□ 0.04
CopeO89079 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CopeO89079 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CopeO89079 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CopeO89079 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.29■□□□□ 0.04
CopeO89079 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.29■□□□□ 0.04
CopeO89079 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CopeO89079 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.29■□□□□ 0.04
CopeO89079 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CopeO89079 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CopeO89079 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CopeO89079 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CopeO89079 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CopeO89079 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms