Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.51□□□□□ -0.73
Sh2d1aO88890 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sh2d1aO88890 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.5□□□□□ -0.73
Sh2d1aO88890 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.5□□□□□ -0.73
Sh2d1aO88890 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Mir8098-201ENSMUST00000184011 137 ntBASIC10.5□□□□□ -0.73
Sh2d1aO88890 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.5□□□□□ -0.73
Sh2d1aO88890 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sh2d1aO88890 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Gm5682-201ENSMUST00000173402 505 ntBASIC10.49□□□□□ -0.73
Sh2d1aO88890 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.49□□□□□ -0.73
Sh2d1aO88890 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms