Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hcn1O88704 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hcn1O88704 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.22□□□□□ -0.13
Hcn1O88704 Gm14140-201ENSMUST00000119999 995 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hcn1O88704 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.22□□□□□ -0.13
Hcn1O88704 Gm9682-201ENSMUST00000197505 556 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Gm45167-201ENSMUST00000208007 322 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.22□□□□□ -0.13
Hcn1O88704 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.22□□□□□ -0.13
Hcn1O88704 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Hcn1O88704 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.22□□□□□ -0.13
Hcn1O88704 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hcn1O88704 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hcn1O88704 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hcn1O88704 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hcn1O88704 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hcn1O88704 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.21□□□□□ -0.13
Hcn1O88704 Gm27525-201ENSMUST00000184465 107 ntBASIC14.21□□□□□ -0.13
Hcn1O88704 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.21□□□□□ -0.13
Hcn1O88704 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.21□□□□□ -0.13
Hcn1O88704 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.21□□□□□ -0.13
Hcn1O88704 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hcn1O88704 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hcn1O88704 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.21□□□□□ -0.13
Hcn1O88704 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hcn1O88704 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn1O88704 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Hcn1O88704 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.14
Hcn1O88704 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn1O88704 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn1O88704 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn1O88704 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hcn1O88704 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hcn1O88704 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.2□□□□□ -0.14
Hcn1O88704 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.2□□□□□ -0.14
Hcn1O88704 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Gm14722-201ENSMUST00000118943 689 ntBASIC14.2□□□□□ -0.14
Hcn1O88704 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.2□□□□□ -0.14
Hcn1O88704 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.2□□□□□ -0.14
Hcn1O88704 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hcn1O88704 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hcn1O88704 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.2□□□□□ -0.14
Hcn1O88704 Gm7787-201ENSMUST00000216858 688 ntBASIC14.2□□□□□ -0.14
Hcn1O88704 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.2□□□□□ -0.14
Hcn1O88704 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hcn1O88704 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hcn1O88704 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms