Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm11478-201ENSMUST00000117851 599 ntBASIC18.96■□□□□ 0.63
Ubr1O70481 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Ubr1O70481 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.96■□□□□ 0.63
Ubr1O70481 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.96■□□□□ 0.63
Ubr1O70481 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.96■□□□□ 0.63
Ubr1O70481 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.96■□□□□ 0.63
Ubr1O70481 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ubr1O70481 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ubr1O70481 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Ubr1O70481 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubr1O70481 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ubr1O70481 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.95■□□□□ 0.62
Ubr1O70481 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ubr1O70481 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Ubr1O70481 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.95■□□□□ 0.62
Ubr1O70481 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.95■□□□□ 0.62
Ubr1O70481 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.95■□□□□ 0.62
Ubr1O70481 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubr1O70481 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubr1O70481 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubr1O70481 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.95■□□□□ 0.62
Ubr1O70481 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ubr1O70481 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ubr1O70481 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.94■□□□□ 0.62
Ubr1O70481 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ubr1O70481 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.94■□□□□ 0.62
Ubr1O70481 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
Ubr1O70481 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.94■□□□□ 0.62
Ubr1O70481 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Ubr1O70481 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ubr1O70481 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ubr1O70481 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ubr1O70481 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ubr1O70481 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Gm15957-201ENSMUST00000118893 974 ntBASIC18.93■□□□□ 0.62
Ubr1O70481 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.93■□□□□ 0.62
Ubr1O70481 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ubr1O70481 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Gm44719-201ENSMUST00000206404 149 ntBASIC18.93■□□□□ 0.62
Ubr1O70481 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ubr1O70481 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ubr1O70481 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.93■□□□□ 0.62
Ubr1O70481 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.93■□□□□ 0.62
Ubr1O70481 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ubr1O70481 Mir6392-201ENSMUST00000184924 108 ntBASIC18.93■□□□□ 0.62
Ubr1O70481 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ubr1O70481 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC18.92■□□□□ 0.62
Ubr1O70481 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC18.92■□□□□ 0.62
Ubr1O70481 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ubr1O70481 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.91■□□□□ 0.62
Ubr1O70481 Gm2495-201ENSMUST00000191160 466 ntBASIC18.91■□□□□ 0.62
Ubr1O70481 Gm44608-201ENSMUST00000206827 855 ntBASIC18.91■□□□□ 0.62
Ubr1O70481 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.91■□□□□ 0.62
Ubr1O70481 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.91■□□□□ 0.62
Ubr1O70481 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ubr1O70481 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.91■□□□□ 0.62
Ubr1O70481 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ubr1O70481 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
Ubr1O70481 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms