Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pdlim3O70209 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.45□□□□□ -0.26
Pdlim3O70209 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.45□□□□□ -0.26
Pdlim3O70209 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pdlim3O70209 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pdlim3O70209 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pdlim3O70209 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pdlim3O70209 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pdlim3O70209 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pdlim3O70209 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Gm27704-201ENSMUST00000185094 107 ntBASIC13.43□□□□□ -0.26
Pdlim3O70209 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.43□□□□□ -0.26
Pdlim3O70209 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.43□□□□□ -0.26
Pdlim3O70209 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pdlim3O70209 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pdlim3O70209 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms