Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Mmp8O70138 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Mmp8O70138 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.05■□□□□ 0.48
Mmp8O70138 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Mmp8O70138 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.05■□□□□ 0.48
Mmp8O70138 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.05■□□□□ 0.48
Mmp8O70138 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Rprl2-201ENSMUST00000157150 290 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Gm27702-201ENSMUST00000184512 56 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Gm2756-201ENSMUST00000195851 400 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Mmp8O70138 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.05■□□□□ 0.48
Mmp8O70138 Chchd1-203ENSMUST00000224633 557 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.05■□□□□ 0.48
Mmp8O70138 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.05■□□□□ 0.48
Mmp8O70138 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mmp8O70138 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.04■□□□□ 0.48
Mmp8O70138 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Mmp8O70138 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.04■□□□□ 0.48
Mmp8O70138 Gm18889-201ENSMUST00000174284 929 ntBASIC18.04■□□□□ 0.48
Mmp8O70138 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Mmp8O70138 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.04■□□□□ 0.48
Mmp8O70138 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Mmp8O70138 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Mmp8O70138 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mmp8O70138 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Mmp8O70138 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.03■□□□□ 0.48
Mmp8O70138 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC18.03■□□□□ 0.48
Mmp8O70138 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.03■□□□□ 0.48
Mmp8O70138 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.03■□□□□ 0.48
Mmp8O70138 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Mmp8O70138 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Gm37230-201ENSMUST00000194491 818 ntBASIC18.03■□□□□ 0.48
Mmp8O70138 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.03■□□□□ 0.48
Mmp8O70138 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Mmp8O70138 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mmp8O70138 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.03■□□□□ 0.48
Mmp8O70138 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.02■□□□□ 0.48
Mmp8O70138 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.02■□□□□ 0.48
Mmp8O70138 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.02■□□□□ 0.48
Mmp8O70138 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Gm2810-201ENSMUST00000118681 990 ntBASIC18.02■□□□□ 0.48
Mmp8O70138 Gm11543-201ENSMUST00000120758 370 ntBASIC18.02■□□□□ 0.48
Mmp8O70138 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.02■□□□□ 0.48
Mmp8O70138 Gm45098-201ENSMUST00000207179 657 ntBASIC18.02■□□□□ 0.48
Mmp8O70138 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mmp8O70138 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Mmp8O70138 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Mmp8O70138 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mmp8O70138 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mmp8O70138 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mmp8O70138 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Mmp8O70138 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Mmp8O70138 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mmp8O70138 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms