Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Rdh5O55240 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rdh5O55240 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rdh5O55240 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rdh5O55240 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.04□□□□□ -0.16
Rdh5O55240 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.04□□□□□ -0.16
Rdh5O55240 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.04□□□□□ -0.16
Rdh5O55240 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.04□□□□□ -0.16
Rdh5O55240 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Rdh5O55240 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.04□□□□□ -0.16
Rdh5O55240 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.04□□□□□ -0.16
Rdh5O55240 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rdh5O55240 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.04□□□□□ -0.16
Rdh5O55240 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rdh5O55240 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rdh5O55240 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.03□□□□□ -0.16
Rdh5O55240 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.03□□□□□ -0.16
Rdh5O55240 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Rdh5O55240 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Rdh5O55240 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rdh5O55240 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.03□□□□□ -0.16
Rdh5O55240 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rdh5O55240 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.03□□□□□ -0.16
Rdh5O55240 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rdh5O55240 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rdh5O55240 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Rdh5O55240 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.02□□□□□ -0.16
Rdh5O55240 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.02□□□□□ -0.16
Rdh5O55240 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.02□□□□□ -0.17
Rdh5O55240 Gm14494-201ENSMUST00000118786 435 ntBASIC14.02□□□□□ -0.17
Rdh5O55240 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.02□□□□□ -0.17
Rdh5O55240 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.02□□□□□ -0.17
Rdh5O55240 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rdh5O55240 Gm2756-201ENSMUST00000195851 400 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms