Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.3□□□□□ -0.44
SncaO55042 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
SncaO55042 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SncaO55042 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
SncaO55042 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SncaO55042 Celf4-206ENSMUST00000224553 1729 ntBASIC12.3□□□□□ -0.44
SncaO55042 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
SncaO55042 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SncaO55042 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SncaO55042 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SncaO55042 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
SncaO55042 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SncaO55042 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.29□□□□□ -0.44
SncaO55042 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.29□□□□□ -0.44
SncaO55042 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.29□□□□□ -0.44
SncaO55042 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.29□□□□□ -0.44
SncaO55042 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.29□□□□□ -0.44
SncaO55042 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SncaO55042 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.29□□□□□ -0.44
SncaO55042 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SncaO55042 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SncaO55042 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SncaO55042 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.28□□□□□ -0.44
SncaO55042 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SncaO55042 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.28□□□□□ -0.44
SncaO55042 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.28□□□□□ -0.44
SncaO55042 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SncaO55042 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.28□□□□□ -0.44
SncaO55042 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.28□□□□□ -0.44
SncaO55042 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SncaO55042 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.28□□□□□ -0.44
SncaO55042 Gm12134-201ENSMUST00000122109 520 ntBASIC12.28□□□□□ -0.44
SncaO55042 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.28□□□□□ -0.44
SncaO55042 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SncaO55042 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.28□□□□□ -0.44
SncaO55042 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
SncaO55042 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SncaO55042 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SncaO55042 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
SncaO55042 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SncaO55042 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SncaO55042 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms