Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Prom1O54990 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.29■□□□□ 0.2
Prom1O54990 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.29■□□□□ 0.2
Prom1O54990 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.29■□□□□ 0.2
Prom1O54990 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Prom1O54990 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.29■□□□□ 0.2
Prom1O54990 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.29■□□□□ 0.2
Prom1O54990 Gm27631-201ENSMUST00000184163 466 ntBASIC16.29■□□□□ 0.2
Prom1O54990 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.29■□□□□ 0.2
Prom1O54990 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prom1O54990 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Prom1O54990 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Prom1O54990 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.29■□□□□ 0.2
Prom1O54990 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Prom1O54990 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Prom1O54990 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.28■□□□□ 0.2
Prom1O54990 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Prom1O54990 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Gm12859-201ENSMUST00000117834 427 ntBASIC16.28■□□□□ 0.2
Prom1O54990 Gm24694-201ENSMUST00000180054 110 ntBASIC16.28■□□□□ 0.2
Prom1O54990 Gm27663-201ENSMUST00000184839 110 ntBASIC16.28■□□□□ 0.2
Prom1O54990 Gm16476-201ENSMUST00000221544 139 ntBASIC16.28■□□□□ 0.2
Prom1O54990 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.28■□□□□ 0.2
Prom1O54990 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.28■□□□□ 0.2
Prom1O54990 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.28■□□□□ 0.2
Prom1O54990 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prom1O54990 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Prom1O54990 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Prom1O54990 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prom1O54990 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Gm6222-201ENSMUST00000120787 396 ntBASIC16.27■□□□□ 0.2
Prom1O54990 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.27■□□□□ 0.2
Prom1O54990 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.27■□□□□ 0.2
Prom1O54990 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.27■□□□□ 0.2
Prom1O54990 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.27■□□□□ 0.2
Prom1O54990 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prom1O54990 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prom1O54990 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Prom1O54990 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.27■□□□□ 0.19
Prom1O54990 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prom1O54990 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prom1O54990 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prom1O54990 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prom1O54990 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.26■□□□□ 0.19
Prom1O54990 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.26■□□□□ 0.19
Prom1O54990 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.26■□□□□ 0.19
Prom1O54990 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prom1O54990 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.26■□□□□ 0.19
Prom1O54990 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.26■□□□□ 0.19
Prom1O54990 Gm9794-201ENSMUST00000202370 423 ntBASIC16.26■□□□□ 0.19
Prom1O54990 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.26■□□□□ 0.19
Prom1O54990 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Prom1O54990 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prom1O54990 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms