Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smarce1O54941 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.63■□□□□ 0.41
Smarce1O54941 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarce1O54941 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarce1O54941 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Gm11764-201ENSMUST00000120221 623 ntBASIC17.63■□□□□ 0.41
Smarce1O54941 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Gm5682-201ENSMUST00000173402 505 ntBASIC17.63■□□□□ 0.41
Smarce1O54941 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Smarce1O54941 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.63■□□□□ 0.41
Smarce1O54941 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarce1O54941 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smarce1O54941 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smarce1O54941 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.62■□□□□ 0.41
Smarce1O54941 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.62■□□□□ 0.41
Smarce1O54941 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarce1O54941 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smarce1O54941 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smarce1O54941 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.61■□□□□ 0.41
Smarce1O54941 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smarce1O54941 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Smarce1O54941 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.61■□□□□ 0.41
Smarce1O54941 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.61■□□□□ 0.41
Smarce1O54941 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Smarce1O54941 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Gm43347-201ENSMUST00000200226 580 ntBASIC17.61■□□□□ 0.41
Smarce1O54941 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarce1O54941 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.6■□□□□ 0.41
Smarce1O54941 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.6■□□□□ 0.41
Smarce1O54941 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.6■□□□□ 0.41
Smarce1O54941 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.6■□□□□ 0.41
Smarce1O54941 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smarce1O54941 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.6■□□□□ 0.41
Smarce1O54941 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Smarce1O54941 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Smarce1O54941 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarce1O54941 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms