Protein–RNA interactions for Protein: O54751

Crx, Cone-rod homeobox protein, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CrxO54751 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CrxO54751 Gm7791-201ENSMUST00000219066 539 ntBASIC10.83□□□□□ -0.68
CrxO54751 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.83□□□□□ -0.68
CrxO54751 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.83□□□□□ -0.68
CrxO54751 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CrxO54751 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CrxO54751 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CrxO54751 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CrxO54751 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CrxO54751 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.82□□□□□ -0.68
CrxO54751 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.82□□□□□ -0.68
CrxO54751 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CrxO54751 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CrxO54751 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
CrxO54751 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CrxO54751 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.82□□□□□ -0.68
CrxO54751 Mir1199-201ENSMUST00000117015 119 ntBASIC10.82□□□□□ -0.68
CrxO54751 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.82□□□□□ -0.68
CrxO54751 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.82□□□□□ -0.68
CrxO54751 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Timm23-208ENSMUST00000226683 750 ntBASIC10.82□□□□□ -0.68
CrxO54751 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CrxO54751 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CrxO54751 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
CrxO54751 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
CrxO54751 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CrxO54751 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CrxO54751 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.81□□□□□ -0.68
CrxO54751 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CrxO54751 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.81□□□□□ -0.68
CrxO54751 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CrxO54751 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
CrxO54751 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.81□□□□□ -0.68
CrxO54751 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.81□□□□□ -0.68
CrxO54751 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CrxO54751 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.81□□□□□ -0.68
CrxO54751 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.81□□□□□ -0.68
CrxO54751 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
CrxO54751 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CrxO54751 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.81□□□□□ -0.68
CrxO54751 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms