Protein–RNA interactions for Protein: O35683

Ndufa1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa1O35683 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.67□□□□□ -0.7
Ndufa1O35683 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ndufa1O35683 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Ndufa1O35683 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa1O35683 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Carlr-201ENSMUST00000181515 2574 ntBASIC10.66□□□□□ -0.7
Ndufa1O35683 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.66□□□□□ -0.7
Ndufa1O35683 Gm10231-201ENSMUST00000181584 441 ntBASIC10.66□□□□□ -0.7
Ndufa1O35683 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Gm10175-202ENSMUST00000208752 441 ntBASIC10.66□□□□□ -0.7
Ndufa1O35683 Gm45328-201ENSMUST00000210942 917 ntBASIC10.66□□□□□ -0.7
Ndufa1O35683 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Ndufa1O35683 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Ndufa1O35683 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Ndufa1O35683 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ndufa1O35683 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ndufa1O35683 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Ndufa1O35683 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ndufa1O35683 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.65□□□□□ -0.7
Ndufa1O35683 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.65□□□□□ -0.7
Ndufa1O35683 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.65□□□□□ -0.7
Ndufa1O35683 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ndufa1O35683 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ndufa1O35683 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ndufa1O35683 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Ndufa1O35683 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ndufa1O35683 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.65□□□□□ -0.71
Ndufa1O35683 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
Ndufa1O35683 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Ndufa1O35683 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ndufa1O35683 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
Ndufa1O35683 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ndufa1O35683 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms