Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Gm33320-201ENSMUST00000192232 530 ntBASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Gm45770-201ENSMUST00000212105 616 ntBASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a3E9PWQ3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm5479-201ENSMUST00000160578 435 ntBASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm27682-201ENSMUST00000183930 110 ntBASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a3E9PWQ3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm11803-201ENSMUST00000119966 444 ntBASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm9550-201ENSMUST00000161130 862 ntBASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm20426-201ENSMUST00000173657 440 ntBASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.53□□□□□ -0.08
Col6a3E9PWQ3 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a3E9PWQ3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms