Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.93□□□□□ -0.34
Dchs1E9PVD3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Dchs1E9PVD3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Gm15782-201ENSMUST00000121073 445 ntBASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Dchs1E9PVD3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm27892-201ENSMUST00000185017 106 ntBASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Dchs1E9PVD3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.9□□□□□ -0.34
Dchs1E9PVD3 Gm27701-201ENSMUST00000184498 110 ntBASIC12.9□□□□□ -0.34
Dchs1E9PVD3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms