Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.9□□□□□ -0.02
Pnldc1B2RXZ1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pnldc1B2RXZ1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pnldc1B2RXZ1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pnldc1B2RXZ1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms