Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col6a4A2AX52 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.48□□□□□ -0.41
Col6a4A2AX52 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.48□□□□□ -0.41
Col6a4A2AX52 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Asic1-205ENSMUST00000228185 1818 ntBASIC12.48□□□□□ -0.41
Col6a4A2AX52 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Gm5479-201ENSMUST00000160578 435 ntBASIC12.48□□□□□ -0.41
Col6a4A2AX52 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col6a4A2AX52 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a4A2AX52 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.47□□□□□ -0.41
Col6a4A2AX52 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.47□□□□□ -0.41
Col6a4A2AX52 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col6a4A2AX52 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col6a4A2AX52 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms