Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc112A0AUP1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc112A0AUP1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Gm7230-201ENSMUST00000173026 815 ntBASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Gm6376-201ENSMUST00000209407 580 ntBASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.93■□□□□ 0.3
Ccdc112A0AUP1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Rps4l-201ENSMUST00000071745 943 ntBASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc112A0AUP1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms