Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm3854A0A1B0GSS6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Mir1897-201ENSMUST00000122581 272 ntBASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm3854A0A1B0GSS6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm45098-201ENSMUST00000207179 657 ntBASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm3854A0A1B0GSS6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3854A0A1B0GSS6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3854A0A1B0GSS6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gm3854A0A1B0GSS6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.77□□□□□ -0.04
Gm3854A0A1B0GSS6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Gm3854A0A1B0GSS6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms