Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm14722-201ENSMUST00000118943 689 ntBASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Timm23-208ENSMUST00000226683 750 ntBASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Igkv8-27A0A0G2JF28 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm15378-201ENSMUST00000121894 207 ntBASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm10052-201ENSMUST00000168019 960 ntBASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm44430-201ENSMUST00000203376 995 ntBASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm7729-201ENSMUST00000050143 801 ntBASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Igkv8-27A0A0G2JF28 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Igkv8-27A0A0G2JF28 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms