Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.48□□□□□ -0.57
Trav6d-7A0A075B6B0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm18622-201ENSMUST00000219361 595 ntBASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm15590-201ENSMUST00000078419 552 ntBASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-7A0A075B6B0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm11780-201ENSMUST00000136880 516 ntBASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm2213-201ENSMUST00000197485 688 ntBASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-7A0A075B6B0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-7A0A075B6B0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-7A0A075B6B0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-7A0A075B6B0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-7A0A075B6B0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav6d-7A0A075B6B0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.46□□□□□ -0.58
Trav6d-7A0A075B6B0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms