Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trdv1A0A075B657 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trdv1A0A075B657 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.29□□□□□ -0.6
Trdv1A0A075B657 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trdv1A0A075B657 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trdv1A0A075B657 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trdv1A0A075B657 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trdv1A0A075B657 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trdv1A0A075B657 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trdv1A0A075B657 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trdv1A0A075B657 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms