Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav17A0A075B655 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav17A0A075B655 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.79□□□□□ -0.52
Trav17A0A075B655 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.79□□□□□ -0.52
Trav17A0A075B655 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Gm43767-201ENSMUST00000198933 381 ntBASIC11.79□□□□□ -0.52
Trav17A0A075B655 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav17A0A075B655 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav17A0A075B655 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.78□□□□□ -0.52
Trav17A0A075B655 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm10231-201ENSMUST00000181584 441 ntBASIC11.78□□□□□ -0.52
Trav17A0A075B655 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm7506-201ENSMUST00000207758 815 ntBASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm10175-202ENSMUST00000208752 441 ntBASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm8655-201ENSMUST00000221159 852 ntBASIC11.78□□□□□ -0.52
Trav17A0A075B655 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav17A0A075B655 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav17A0A075B655 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms