Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Gm29667-201ENSMUST00000190817 490 ntBASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav8n-2A0A075B633 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav8n-2A0A075B633 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm4875-201ENSMUST00000118257 786 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm29310-201ENSMUST00000185468 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21825-201ENSMUST00000185728 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm29109-201ENSMUST00000185895 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21896-201ENSMUST00000186520 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21873-201ENSMUST00000186728 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21794-201ENSMUST00000187056 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21880-201ENSMUST00000187275 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21826-201ENSMUST00000187451 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21198-201ENSMUST00000188393 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21749-201ENSMUST00000189343 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21901-201ENSMUST00000189568 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm29424-201ENSMUST00000189716 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm28599-201ENSMUST00000189838 694 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21867-201ENSMUST00000189917 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm29269-201ENSMUST00000190087 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21722-201ENSMUST00000190153 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm28423-201ENSMUST00000190701 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21899-201ENSMUST00000190745 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21910-201ENSMUST00000191163 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21849-201ENSMUST00000191571 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm28678-201ENSMUST00000191593 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm20910-201ENSMUST00000193268 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm21871-201ENSMUST00000194621 696 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm43433-201ENSMUST00000196573 481 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Dupd1-202ENSMUST00000224735 548 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav8n-2A0A075B633 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav8n-2A0A075B633 Gm16476-201ENSMUST00000221544 139 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms