Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav10nA0A075B622 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Gm14140-201ENSMUST00000119999 995 ntBASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Psmb5-202ENSMUST00000227257 622 ntBASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav10nA0A075B622 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Gm12008-201ENSMUST00000117791 755 ntBASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Gm1401-201ENSMUST00000122048 772 ntBASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Gm5364-201ENSMUST00000216789 889 ntBASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav10nA0A075B622 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav10nA0A075B622 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav10nA0A075B622 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms