Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-1A0A075B5Z7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm9824-201ENSMUST00000178707 561 ntBASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5-1A0A075B5Z7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm7774-201ENSMUST00000200064 533 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm9182-201ENSMUST00000217829 639 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 BC037039-201ENSMUST00000192003 2205 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.72□□□□□ -0.37
Trav5-1A0A075B5Z7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav5-1A0A075B5Z7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav5-1A0A075B5Z7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms