Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H2afb3S4R1G7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.37□□□□□ -0.27
H2afb3S4R1G7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Ank2-226ENSMUST00000189368 339 ntBASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb3S4R1G7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Gm13418-201ENSMUST00000119097 944 ntBASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Gm43347-201ENSMUST00000200226 580 ntBASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb3S4R1G7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Gm37153-201ENSMUST00000193637 231 ntBASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb3S4R1G7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms