Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Nr1h3Q9Z0Y9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm15693-201ENSMUST00000120470 637 ntBASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.13■□□□□ 0.17
Nr1h3Q9Z0Y9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nr1h3Q9Z0Y9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm6415-201ENSMUST00000118488 348 ntBASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nr1h3Q9Z0Y9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nr1h3Q9Z0Y9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms