Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Clip2Q9Z0H8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm18737-201ENSMUST00000173594 937 ntBASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm27920-201ENSMUST00000183953 96 ntBASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clip2Q9Z0H8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Gm2810-201ENSMUST00000118681 990 ntBASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clip2Q9Z0H8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clip2Q9Z0H8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms