Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim3Q9R1R2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Efs-202ENSMUST00000227037 2540 ntBASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm4899-201ENSMUST00000178708 719 ntBASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.98□□□□□ -0.17
Trim3Q9R1R2 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim3Q9R1R2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Gm11779-201ENSMUST00000118541 368 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Gm8318-201ENSMUST00000182954 872 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Gm7787-201ENSMUST00000216858 688 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim3Q9R1R2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.97□□□□□ -0.17
Trim3Q9R1R2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Gm9727-201ENSMUST00000161387 555 ntBASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim3Q9R1R2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms