Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RpgrQ9R0X5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.13■□□□□ 0.01
RpgrQ9R0X5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RpgrQ9R0X5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RpgrQ9R0X5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RpgrQ9R0X5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RpgrQ9R0X5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Gm11764-201ENSMUST00000120221 623 ntBASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RpgrQ9R0X5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Mzt1-203ENSMUST00000227948 952 ntBASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RpgrQ9R0X5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm27646-201ENSMUST00000183989 110 ntBASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm6550-201ENSMUST00000187574 993 ntBASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm7787-201ENSMUST00000216858 688 ntBASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RpgrQ9R0X5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RpgrQ9R0X5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 297 ms