Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm6376-201ENSMUST00000209407 580 ntBASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm9520-201ENSMUST00000209460 1253 ntBASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm44975-201ENSMUST00000207435 1390 ntBASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.33■□□□□ 0.04
Msh5Q9QUM7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm13418-201ENSMUST00000119097 944 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm4535-201ENSMUST00000182274 558 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm8581-201ENSMUST00000188636 890 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm10355-201ENSMUST00000097146 517 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Gm43980-201ENSMUST00000204899 1612 ntBASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Msh5Q9QUM7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Olfr1153-201ENSMUST00000052300 957 ntBASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Msh5Q9QUM7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm15074-201ENSMUST00000117603 936 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm11780-201ENSMUST00000136880 516 ntBASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.3■□□□□ 0.04
Msh5Q9QUM7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms