Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 AV356131-201ENSMUST00000206201 750 ntBASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smco4Q9JIS3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Gm18041-201ENSMUST00000218210 618 ntBASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Smco4Q9JIS3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smco4Q9JIS3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms