Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Ndufa11Q9D8B4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Gm17150-201ENSMUST00000165577 381 ntBASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndufa11Q9D8B4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndufa11Q9D8B4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Gm12585-201ENSMUST00000117307 290 ntBASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndufa11Q9D8B4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms