Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4bQ9D8B3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Gm38042-201ENSMUST00000191614 5208 ntBASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Psmb5-202ENSMUST00000227257 622 ntBASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4bQ9D8B3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp4bQ9D8B3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp4bQ9D8B3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
Chmp4bQ9D8B3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp4bQ9D8B3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4bQ9D8B3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms