Protein–RNA interactions for Protein: Q9D4E6

Pabpc6, Polyadenylate-binding protein, mousemouse

Known RBP Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc6Q9D4E6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Gm5479-201ENSMUST00000160578 435 ntBASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pabpc6Q9D4E6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pabpc6Q9D4E6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pabpc6Q9D4E6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Gm38225-201ENSMUST00000194001 393 ntBASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pabpc6Q9D4E6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pabpc6Q9D4E6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms